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Crab Meal and Garlic Health. This is Important.

  • Writer: Jere Folgert
    Jere Folgert
  • Nov 14
  • 10 min read

Updated: Nov 27

Crab Meal (Chitin and Chitin-Containing Amendments) can potentially help prevent disease in your garlic crop. Really!


"Hardneck garlic grown in regions with cold winters and a history of white rot (Sclerotium cepivorum), Fusarium basal rot, or stem-and-bulb nematode (Ditylenchus dipsaci). Hardneck Galric is one of the crops that responds most dramatically to crab-meal amendment."


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What is Chitin?

Chitin (pronounced KYE-tin) is a tough, natural material that acts like armor for many living things. You can think of it as a long chain of sugar molecules. Chitin is also found in the cell walls of fungi (like mushrooms). It's what makes the hard shells of creatures like:

  • Crabs

  • Shrimp

  • Lobsters

  • Insects


A Natural Boost for Soil

Chitin is very common in nature, and we can get a lot of it from the parts of the seafood industry that usually get thrown away, like crab and shrimp shells. This makes it a great, eco-friendly ingredient to add to farm soil! When we use it this way, it helps make farming more sustainable (meaning it's good for the planet over the long term).


How Chitin Helps Plants

When farmers mix finely ground shells—often sold as "crab meal" or "shrimp meal"—into the soil, something amazing happens:

  1. A special group of tiny living things in the soil, called microbes (mostly bacteria and fungi), start to eat the chitin.

  2. To break down the tough material, these microbes release special tools called enzymes (the main ones are chitinases).

  3. As the microbes feast on the chitin, a whole series of positive changes begin. This makes the soil healthier and helps the plants grow strong!


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What is Crab Meal

Chitin is a strong, natural carbohydrate (a long chain of sugar molecules) that makes up the hard shells of crabs, shrimp, lobsters, insects, and the cell walls of fungi. Because it is so common in nature and comes from waste products of the seafood industry, it is now seen as a valuable, environmentally friendly soil amendment for sustainable farming.


When finely ground crustacean shells—usually sold as “crab meal” or “shrimp meal”—are worked into the soil, a specific group of soil bacteria and fungi start to break the chitin down. These microbes release enzymes called chitinases and chitosanases that slowly digest the tough material. As they feed on the chitin, a whole chain of positive changes begins in the soil and the plants growing in it.


These changes include:

  • Faster release and recycling of nutrients locked inside the shells (especially nitrogen, calcium, and trace minerals)

  • Increased activity of beneficial plant-growth-promoting bacteria (often called PGPR) that live around plant roots

  • Activation of the plant’s own immune system, making it naturally more resistant to diseases (a process called induced systemic resistance)

  • Direct suppression of harmful fungi, pathogenic bacteria, and plant-parasitic nematodes that live in the soil


Chitin is a strong, natural carbohydrate (a long chain of sugar molecules) that makes up the hard shells of crabs
Chitin is a strong, natural carbohydrate (a long chain of sugar molecules) that makes up the hard shells of crabs

Modern agriculture faces the dual challenge of maintaining yields while reducing reliance on synthetic pesticides and fertilizers. Biostimulants and organic amendments derived from marine by-products offer a promising avenue. Crustacean shell waste (primarily shrimp, crab, and lobster) is rich in chitin (20–40 % dry weight), protein, carotenoids (astaxanthin), and minerals (especially calcium carbonate). Of these components, chitin has emerged as the biologically most active fraction for soil and plant health.


Garlic is an ideal model crop for studying chitin amendments because:

  • It is highly susceptible to several soil-borne fungal pathogens (Fusarium spp., Sclerotium cepivorum, Botrytis spp.) and nematodes (Ditylenchus dipsaci).

  • It has a high sulfur demand, and many chitin-degrading bacteria also participate in sulfur cycling.

  • Its long growing season (6–9 months) allows observable long-term effects on soil biology.


Biochemistry and Microbiology of Chitin Degradation in Soil

Chitin is recalcitrant in its native crystalline form (α-chitin in crustacean shells). Degradation requires a consortium of bacteria and actinomycetes possessing exo- and endo-chitinases, N-acetylglucosaminidases, and chitosanases. Key genera repeatedly isolated from chitin-amended soils include:

  • Streptomyces spp. (especially S. griseus, S. halstedii)

  • Bacillus spp. (B. subtilis, B. thuringiensis, B. licheniformis)

  • Pseudomonas spp.

  • Flavobacterium spp.

  • Serratia marcescens

  • Chitinophaga spp.

  • Lysobacter spp.



Bacteria that break down chitin in the soil
Bacteria that break down chitin in the soil

Chitin-Degrading Microbes: The Soil's Cleanup Crew

Here is a more detailed list of some of the most important groups of bacteria that break down chitin in the soil. These organisms are key players in soil health because they recycle nutrients and often act as natural pest and disease control agents. Here's a breakdown :


1. Streptomyces spp. (Actinomycetes)

  • Role in Soil: Streptomyces are not typical bacteria; they are actinomycetes, which means they grow like tiny fungi, forming branching filaments. They are responsible for the "earthy" or "fresh soil" smell (caused by a compound called geosmin).

  • Chitin Connection: They are among the most powerful chitin degraders and are known for producing a wide range of antibiotics (like streptomycin, which was first isolated from S. griseus).

  • Specific Species:

    • S. griseus: Famous antibiotic producer.

    • S. halstedii: Known for antifungal activity and promoting plant growth.

  • Why they matter: They are crucial for disease suppression in the soil because their antifungal compounds attack the same pathogens that cause plant root rot.


2. Bacillus spp.

  • Role in Soil: Bacillus species are rod-shaped bacteria that form tough, protective endospores when conditions are poor. This makes them highly resistant and easy to use in commercial bio-control products.

  • Chitin Connection: They produce powerful chitinases (enzymes that chop up chitin) and often have plant-growth-promoting (PGP) effects.

  • Specific Species:

    • B. subtilis: Widely used as a biopesticide and biofertilizer due to its ability to colonize roots and produce antifungal compounds.

    • B. thuringiensis (Bt): Famous for producing a crystal protein that is toxic to insects (like caterpillars) but safe for mammals.

    • B. licheniformis: Excellent nutrient cycler; known for breaking down complex organic matter.

  • Why they matter: They are the workhorses of bio-control, offering direct protection against pathogens and even insects.


3. Pseudomonas spp.

  • Role in Soil: These are highly versatile and motile (able to move) bacteria. Many species are known as Plant-Growth-Promoting Rhizobacteria (PGPR).

  • Chitin Connection: They produce chitinase enzymes and are excellent at controlling fungal and bacterial pathogens by producing a variety of compounds, including siderophores (which bind to iron, starving the pathogens) and hydrogen cyanide.

  • Why they matter: They are major players in root protection and nutrient availability, ensuring the plant can get enough iron, which is essential for growth.


4. Serratia marcescens

  • Role in Soil: Serratia is unique because some strains produce a striking red pigment called prodigiosin.

  • Chitin Connection: It is an extremely efficient chitin degrader and has been heavily studied for its nematocidal (nematode-killing) and antifungal properties.

  • Why they matter: It provides a strong, specific attack on plant-parasitic nematodes (tiny worms that attack roots) and fungal diseases.


5. Flavobacterium spp.

  • Role in Soil: These bacteria are often yellow-pigmented (hence the name, Flavus meaning yellow). They are common in soil and water environments.

  • Chitin Connection: They are effective chitin degraders and contribute significantly to the general cycling of organic matter and nutrients in the soil.

  • Why they matter: They are key to the general health and decomposition process in the soil ecosystem.


6. Chitinophaga spp.

  • Role in Soil: As their name suggests, these organisms are dedicated "chitin eaters". They belong to the phylum Bacteroidetes.

  • Chitin Connection: They have highly specialized enzyme systems designed specifically to break down chitin efficiently.

  • Why they matter: They ensure the initial, rapid breakdown of the tough chitin structure.


7. Lysobacter spp.

  • Role in Soil: Lysobacter are a genus of soil bacteria that are famous for their ability to lyse (break down or destroy) other microbes.

  • Chitin Connection: They are fierce predators in the microbial world, producing potent lytic enzymes (like chitinases and $\beta$-1,3-glucanases) that can directly dissolve the cell walls of fungi and other bacteria.

  • Why they matter: They are a powerful, direct biological agent for suppressing fungal pathogens like Rhizoctonia and Fusarium through direct attack.


These organisms hydrolyze chitin into chitooligosaccharides and N-acetylglucosamine. The partial degradation products (degree of polymerization 2–8) are the primary signaling molecules responsible for downstream effects.


Mechanisms of Action

Stimulation of Beneficial Microflora and Nutrient Cycling Chitin is a selective carbon and nitrogen source. Addition of crab meal typically increases actinomycete and chitinolytic bacterial populations in the soil within 2–6 weeks. These microbes mineralize organically bound N, P, and S, often increasing plant-available forms by 15–40 % compared to unamended controls.


3.2 Suppression of Soil-Borne Pathogens and Nematodes Chitinolytic microorganisms produce a suite of secondary metabolites and lytic enzymes:

  • Chitinases and types of glucanases degrade fungal cell walls (direct mycoparasitism).

  • Antibiotics (e.g., zwittermicin A from Bacillus cereus UW85, phenazines from Pseudomonas).

  • Hydrogen cyanide, siderophores, and proteases.

  • Parasitic nematodes are suppressed both by direct toxicity of ammonia released during deacetylation and by stimulation of nematophagous fungi (Paecilomyces lilacinus, Pochonia chlamydosporia).


Meta-analyses show average disease reduction of 10–70 % for Fusarium wilt, Rhizoctonia damping-off, and white rot (Sclerotium cepivorum) in Allium crops. Induction of Plant Systemic Resistance Chitooligosaccharides are recognized by plant pattern-recognition receptors (e.g., CERK1 in Arabidopsis and orthologs in monocots). In garlic, foliar and bulb chitinase activity has been shown to increase 2–5- old after soil crab-meal incorporation.


Improvement of Soil Structure The calcium carbonate in crab shells acts as a liming agent (pH increase 0.2–0.8 units), while residual protein and chitin enhance aggregation via microbial exudates (glomalin-like glycoproteins).This triggers:

  • Salicylic acid (SA), jasmonic acid (JA), and ethylene signaling pathways.

  • Priming of pathogenesis-related (PR) proteins: PR-1, PR-2 (β-1,3-glucanase), PR-3 (chitinase), PR-4, defensins, thionins.

  • Increased lignification and callose deposition.


Allicin and other organosulfur compounds in garlic are enhanced because many chitinolytic Streptomyces and Bacillus species also oxidize elemental sulfur and promote plant sulfate uptake.


Practical Recommendations for Garlic Growers

Product Selection: Use fully composted or finely ground crab meal with ≥20 % chitin content. Avoid deproteinized, chemically deacetylated chitosan unless targeting foliar application.


Application Rates and Timing

  • Heavy soils, high disease pressure: 3–5 t ha⁻¹ (≈ 1,200–2,000 lb/acre)

  • Light soils, preventative: 1–2 t ha⁻¹

  • Incorporate 4–8 weeks before planting to allow initial microbial bloom.

  • Split applications (50 % pre-plant, 50 % sidedress at 4–6 leaf stage) maximize nematode control.


Incorporation Methods Broadcast and incorporate 10–15 cm deep with tillage or heavy disc. In no-till systems, surface-apply and rely on earthworm activity.


Compatibility Highly compatible with compost, cover crops, and biological inoculants (Trichoderma, Bacillus subtilis strains). Avoid simultaneous high-rate synthetic fungicides that inhibit actinomycetes.


Economic and Regulatory Notes Cost in North America (2025): US $400–700 per ton delivered. Typical ROI for garlic: 3:1 to 8:1 in fields with moderate to high white-rot history.


Environmental Considerations Crustacean meal is a byproduct of seafood processing; its agricultural use diverts waste from landfills and reduces methane emissions. Heavy-metal content (Cd, Pb) in reputable commercial products is well below CODEX and USDA organic limits.


Chitin-rich crab meal is far more than a simple calcium or nitrogen source. It functions as a targeted prebiotic that selectively enriches a guild of soil microorganisms capable of mineralizing nutrients, parasitizing pathogens, and triggering plant defense responses. For garlic growers battling white rot, Fusarium, and nematodes while seeking higher allicin content and storability, the incorporation of crab meal represents one of the most effective, environmentally sound tools currently available.


Hardneck garlic grown in regions with cold winters and a history of white rot (Sclerotium cepivorum), Fusarium basal rot, or stem-and-bulb nematode (Ditylenchus dipsaci) is one of the crops that responds most dramatically to crab-meal amendment. Multiple field observations and replicated trials (Pacific Northwest, Ontario, Spain, and China) consistently show 50–80 % reduction in white-rot incidence, 20–40 % higher marketable yields, larger bulb size, better wrapper-leaf retention, and significantly improved storage life when crab meal is used preventatively. The higher allicin and total organosulfur content that results from chitin-induced microbial sulfur cycling is especially valuable for hardneck cultivars grown for culinary quality and seed production. Therefore, I strongly recommend incorporating crab meal as a standard practice for any hardneck garlic grower facing soil-borne disease pressure or seeking to build long-term soil suppressiveness.


Practical quantity for a 1,000 ft² (≈93 m²) garlic plot Target rate: 2.5–3.5 kg of high-quality crab meal per 1 m² (commercial products typically 25–35 % chitin). For 93 m² this equals 5.1–7.2 lb per 1,000 ft² (round to 5.5–7.5 lb for simplicity).


  • Preventative / low disease pressure: 5.5–6 lb total

  • Moderate to high white-rot or nematode history: 7–7.5 lb total


Apply 60–70 % (4–5 lb) broadcast and incorporated 4–8 weeks before planting, and the remainder (2–2.5 lb) sidedressed or top-dressed in early spring at the 4–6 leaf stage for a second microbial boost. At current 2025 bulk prices of $0.25–$0.40 per pound delivered, the total amendment cost is only $1.40–$3.00 per 1,000 ft²—an inexpensive insurance policy that typically pays for itself many times over in reduced losses and higher-grade bulbs.



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The Last Clove

we've learned that chitin, the tough material from crab and shrimp shells, is much more than just a fertilizer—it's a powerful soil conditioner. By simply adding products like crab meal to your garden, you’re not just feeding your plants; you're actively recruiting an army of beneficial soil microbes. These microscopic allies release enzymes that suppress diseases like white rot and nematodes, while boosting your plant’s natural immunity and recycling vital nutrients. For gardeners struggling with soil-borne issues, especially when growing crops like garlic that respond so dramatically to this natural defense system, the decision is clear. Don't just grow your plants; start cultivating a living, disease-suppressive soil ecosystem today and witness the rewarding difference in your next harvest!



Crabby Garlic Farm
Crabby Garlic Farm


References (selected)

  • Beier, S., & Bertilsson, S. (2013). Bacterial chitin degradation—mechanisms and ecophysiological strategies. Frontiers in Microbiology, 4, 149.

  • Cretoiu, M. S., et al. (2013). Chitinolytic microorganisms in soil respond to chitin amendment. Applied and Environmental Microbiology, 79(2), 658–667.

  • Debode, J., et al. (2020). Chitin mixtures suppress Fusarium wilt and induce systemic resistance in tomato. Biological Control, 141, 104143.

  • El-Sayed, A. M., et al. (2018). Effect of crab shell chitosan on growth and health-promoting compounds of garlic. Journal of Agricultural Science, 10(6), 123–134.

  • Ren, H. Y., et al. (2002). Control of garlic white rot with crab shell meal. Plant Protection (China), 28(4), 19–21.



Jere Folgert is an award-winning wildlife filmmaker, photographer, and the dedicated owner of GROeat Farm in Bozeman, Montana. A decorated Army Veteran with a background in environmental science, Jere's passion for wild places and nature is matched by his commitment to agriculture, a practice learned from his Polish grandmother. His GROeat Farm specializes in growing premium, naturally raised hardneck garlic, employing sustainable methods like cover cropping and manual harvesting. The farm focuses on preserving diverse garlic varieties and providing high-quality seed and culinary bulbs, continuing a family legacy while promoting eco-friendly farming practices in the challenging Montana climate.


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